Six sections are keyed out separately in FunKey because their species are highly distinctive, or else by treating the sections separately, the remaining sections are more uniform in the diagnostic characters. Sections keyed out separately are: Adonideae (two species), Caespitosae (M. leaniana), Calodontes (four species), Metuloidiferae (M. cystidiosa), Nargan (M. nargan), and Sacchariferae (six species).
Two of the sections of Mycena accepted by Grgurinovic (2002) are now treated as separate genera: section Viscidocruentae as Cruentomycena and section Roridae as Roridomyces.
The remaining sections keyed out as Mycena (other) are:
Section Cinerellae (cheilocystidia clavate, with coarse protuberances): M. mijoi, M. nivalis and M. subvulgaris.
Section Clavulares (stipe with a basal disc): M. subalbida (subglobose spores).
Section Cyanocephalae (blue pileus, stipe with a basal disc): M. interrupta.
Section Filipides (cheilocystidia usually with evenly spaced protuberances): M. austrofilopes (with var. roseobrunnea).
Section Fragilipedes (cheilocystidia smooth or with few, coarse protuberances): M. albidofusca (with a distinct pale spot in the pileus centre), M. atrata, M. atroavellanea, M. australiana, M. fuhreri, M. fusca, M. lilliria, M. kyeema (unusual in having a combination of smooth pileipellis hyphae and the absence of clamp connections), M. lageniformis, M. marangania, M. simpsonii, M. subgalericulata (name often used in a broad sense in Australian literature), M. tallangattensis, M. trachycephala, M. tuvara and M. waralya.
Section Galactopoda (with blood-red latex): M. insueta, M. kuurkacea (= M. sanguinolenta in the sense of Australian authors) and M. toyerlaricola.
Section Hygrocyboideae (pileus and stipe viscid, the stipe usually yellow; members of this section have been referred to as M. epipterygia in Australian literature): M. murna, M. nyula, M. tasmaniensis and M. tuuwuulensis.
Section Lactipides (white or watery latex): M. neerimensis and M. thunderboltensis.
Section Maldae (pileus small, pale, stipe and pileus not viscid, criniform stipes present): M. maldea.
Section Mulawaestres (pileus brown, pileus and stipe glutinous, lamellar edge brown): M. mulawaestris.
Section Mycena (Australian species often with smooth pileipellis hyphae): M. austromaculata, M. cunninghamiana, M. eucalyptorum, M. subnigra and M. yuulongicola.
Section Polyadelphia (stipe arising from a basal patch of mycelium or radiating fibrils): M. albidocapillaris (= M. subcapillaris).
Section Rubromarginatae: M. kurramulla (lamellae adnate with a decurrent tooth to subdecurrent, edge red).
Bougher, N.L. & Syme, K. (1998), Fungi of Southern Australia. University of Western Australia Press, Nedlands. [Description, Illustration and Microcharacters of M. subgalericulata]
Fuhrer, B. (2005), A Field Guide to Australian Fungi. Bloomings Books, Hawthorn. [Description and Illustration of M. albidocapillaris, M. albidofusca, M. aff. atrata, M. austrofilopes, M. aff. epipterygia, M. interrupta, M. kurramulla, M. kuurkacea, M. maldea, M. marangania, M. mijoi, M. mulawaestris, M. nivalis, M. subgalericulata, M. subvulgaris, M. toyerlaricola, M. yuulongicola and several unnamed species]
Fuhrer, B. & Robinson, R. (1992), Rainforest Fungi of Tasmania and South-east Australia. CSIRO Press, East Melbourne. [Illustration of M. epipterygia, M. interrupta, M. albidocapillaris (as M. subcapillaris) and an unnamed species]
Grey, P. & Grey, E. (2005), Fungi Down Under. Fungimap, South Yarra. [Description, Illustration and Map for M. interrupta]
Grgurinovic, C.A. (1997a), Larger Fungi of South Australia. The Botanic Gardens of Adelaide and State Herbarium and The Flora and Fauna of South Australia Handbooks Committee, Adelaide. [Key to South Australian species and Description and Microcharacters of M. albidocapillaris, M. albidofusca, M. australiana, M. austrofilopes, M. austromaculata, M. cunninghamiana, M. eucalyptorum, M. fusca, M. kurramulla, M. kuurkacea group ( as M. sanguinolenta), M. kyeema, M. lilliria, M. marangania, M. maldea, M. nyula, M. subalbida, M. subgalericulata, M. subnigra, M. subvulgaris and M. waralya, and Illustration of M. albidofusca, M. cunninghamiana, M. kurramulla and M. kuurkacea group (as M. sanguinolenta)]
Grgurinovic, C.A. (2003), The genus Mycena in south-eastern Australia. Fungal Diversity Press, Hong Kong and Australian Biological Resources Study, Canberra. [Comprehenisve monograph inlcuding Description and Microcharacters for and Key to 61 Australian species of Mycena, along with B&W Illustration of most species, and Illustration of about half the species]
McCann, I.R. (2003), Australian Fungi Illustrated. Macdown Productions, Vermont. [Illustration of M. albidofusca, M. epipterygia, M. interrupta, M. kuurkacea group (as M. sanguinolenta) and several unnamed species]
Young, A.M. (2005b), A Field Guide to the Fungi of Australia. University of New South Wales Press, Sydney. [Description and Illustration of M. interrupta, and Description and B&W Illustration of M. epipterygia, M. kuurkacea group (as M. sanguinolenta) and M. subgalericulata]